Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015792092.1_cds_XP_016510513.1_2260
CDS Infomation

[gene=LOC107827819] [db_xref=GeneID:107827819] [protein=ninja-family protein AFP3-like] [protein_id=XP_016510513.1] [location=complement(join(3075..3463,5384..6011))] [gbkey=CDS]
Sequence

ATGGCGGAAGCTGAAGAAAATAGGGAAAAGAGGAGTCTTTCAATGCAAATGAATGGTTTT
TCAAGAGATCTGTTGCATAAATTCATGAACAGAAATAATATTCAAGGGAAATACCAAGGA
ATTCCCAATGAAAATGAGGAGGACGAAGATGATATAGAGCTGAGCTTGGGGCTTTCATTA
AACGGCCGATTTGGTGTGGACCCAGAAAGAGCTAAAAGACTCAAACGTTCTTCTTCAATC
AATAACGTTGTGTTCACTAATGGTGAAGACAGTAATAATAGCCGTGCATTTCCTTTTGGC
TCGTACGCAACTCTAGCAAGGACGTGCTCGTTACCCGTTGAAGCAGAGGAGGAGTGCAGA
AAACGGAAGGAGATGCAATCGCTGAGGCGTTTGGAGGCAAAGAGGAAGAGATGGGAGAAA
TTACAGAATGTTAGAGTGGTGAAAGATAAGGTTGATTTGGAGGAGAATCGTGAAGAAAAT
GGGAATGGTTATAGTAATGGCAAGGGTTCAGTTGGAAATATTATTAATGGTAATAATGGG
AATTCCTTGCCGTTGTCACAAGGGTCGATGGGTTCACAGGGCAGTGGTTCTTCAGGAATT
TCTGATTTTGGGAGTCAACCCATTCAAGGGAGAAGTGACTGTACTGGGACAAATACTCCC
ACTAGTATTAAGCCTTCAGAGCAAGAGCATGAACAGAAACCGGTAGCTGCACAACCCGAA
ACTACAAGCGAAAAAGCACCTAGCATATGTAATGGAAATGCTAGCAAGGAAGCAAAAGAA
ATGTTCAAAAACTTCATGCTCAATATGCCTTGTGTCTCCACAAAAGGCGACGGGCCAAAC
GGCAAGAAGATTGAAGGATTCTTATACAGATATAATAAGGGAGAAGAAGTGCGAATAGTG
TGTGTTTGTCATGGTAACTTCCACTCCCCAGCTGAGTTTGTCAAGCACGCTGGTGGAAGT
GATGTTGCAAACCCGTTGAGGCATATTGTTGTCAATCCTTCGCCTCTGTTGGGATGA

Peptide Sequence

PEP ID

XP_016510513.1
PEP Infomation

PREDICTED: ninja-family protein AFP3-like [Nicotiana tabacum]
Sequence

MAEAEENREKRSLSMQMNGFSRDLLHKFMNRNNIQGKYQGIPNENEEDEDDIELSLGLSL
NGRFGVDPERAKRLKRSSSINNVVFTNGEDSNNSRAFPFGSYATLARTCSLPVEAEEECR
KRKEMQSLRRLEAKRKRWEKLQNVRVVKDKVDLEENREENGNGYSNGKGSVGNIINGNNG
NSLPLSQGSMGSQGSGSSGISDFGSQPIQGRSDCTGTNTPTSIKPSEQEHEQKPVAAQPE
TTSEKAPSICNGNASKEAKEMFKNFMLNMPCVSTKGDGPNGKKIEGFLYRYNKGEEVRIV
CVCHGNFHSPAEFVKHAGGSDVANPLRHIVVNPSPLLG

Transcript Sequence

Gene sequence data has not been registered.